FreeAgent vs QuickBooks 2026:
UK Accounting Software for Freelancers & Small Businesses

FreeAgent is purpose-built for UK freelancers, contractors, and small limited companies — with payroll, Self Assessment, Corporation Tax, and Making Tax Digital all included as standard, plus a free plan for NatWest and RBS business banking customers. QuickBooks Online is the global accounting powerhouse with deep reporting, inventory management, and a massive integrations ecosystem, but UK prices rose sharply in January 2026. We tested both platforms across pricing, MTD compliance, payroll, invoicing, reporting, and support to give you a clear verdict for 2026.

FreeAgent
Free (NatWest/RBS) / From £19/month + VAT
4.3
★★★★
VS
Compare
QuickBooks Online
From £16/month + VAT (Simple Start)
4.5
★★★★★
Quick Comparison Verdict
FreeAgent
Free (NatWest/RBS) / From £19/mo + VAT
4.3
Overall
Score
VS
QuickBooks Online
From £16/month + VAT
4.5
Overall
Score
QuickBooks Online edges ahead on overall score — but the practical choice depends sharply on your business type and location. QuickBooks leads on reporting depth, inventory management, integrations, and scalability for growing businesses. FreeAgent leads on UK tax compliance depth — Self Assessment, Corporation Tax, and MTD for Income Tax are all handled natively — on payroll included as standard at no extra cost, and on value for money for sole traders and limited company contractors. For UK freelancers, contractors, and small limited company directors who want a platform built around their specific compliance needs, FreeAgent is the more purpose-built tool. For businesses that need advanced reporting, inventory tracking, multi-currency support beyond the basics, or a platform with deep integrations into a wider software ecosystem, QuickBooks Online — despite its significant 2026 price increases — delivers the more capable accounting foundation.

The FreeAgent vs QuickBooks comparison is one of the most important choices a UK freelancer, contractor, or small limited company director faces when selecting accounting software. Both platforms are cloud-based, both are Making Tax Digital-compatible, and both serve small businesses — but they start from entirely different design philosophies. FreeAgent was built from the ground up as a UK-specific platform for the self-employed and small limited company, with HMRC compliance woven into every layer of the product. QuickBooks Online is a globally deployed platform from Intuit that has adapted extensively for the UK market but retains the architecture and pricing model of a product designed to serve businesses from sole traders to mid-market companies across many countries. Understanding that distinction is the most useful starting point for any UK business choosing between them. For a broader view of the accounting software market, our guide to invoicing software for small businesses covers both platforms within the wider UK and global landscape.

Pricing & Plans

The pricing structures of these two platforms diverged significantly in early 2026, with QuickBooks implementing its latest round of UK price increases in January 2026 while FreeAgent held its pricing steady. All FreeAgent prices exclude 20% VAT; all QuickBooks UK prices similarly exclude VAT.

FreeAgent pricing (UK, as of May 2026): FreeAgent prices its plans by business structure rather than by features or user count. The sole trader plan costs £19 per month. The partnership or LLP plan costs £27 per month. The limited company plan — the most commonly purchased tier for UK contractors and directors — costs £33 per month. The landlord plan costs £10 per month. A 50% introductory discount applies for the first six months on monthly billing, or the first year on annual billing, halving each price for new subscribers. Critically, every FreeAgent plan includes the full feature set: invoicing, expense tracking, time tracking, payroll, VAT returns, Self Assessment filing, Corporation Tax estimates and filing (for limited companies), Making Tax Digital compliance, bank feeds, project management, and unlimited users — all at the same price regardless of how many team members or accountants access the account. There is also a completely free route: NatWest, Royal Bank of Scotland, Ulster Bank, and Mettle business banking customers can access FreeAgent at no cost for as long as they retain their account, making it free for a substantial number of UK business owners. A 30-day free trial is available to all new subscribers.

QuickBooks Online UK pricing (as of January 2026): QuickBooks operates five UK tiers. The Sole Trader plan costs £10 per month and is intended for the self-employed with no VAT requirements — it does not include VAT filing. The Simple Start plan costs £16 per month and adds VAT submissions, MTD compliance, and basic reporting for a single user. The Essentials plan costs £33 per month and adds up to three users, bill management, and time tracking — this plan increased by approximately 15% in January 2026. The Plus plan costs £50 per month and adds inventory tracking, project profitability, and up to five users — this plan increased by approximately 47% in January 2026, the largest single price rise across QuickBooks’ UK tiers. The Advanced plan costs £115 per month for larger businesses needing custom reporting and role-based access. Payroll is an optional paid add-on on all QuickBooks UK plans and is not included in any subscription price. A 30-day free trial is available on all tiers.

QuickBooks UK Price Increases in 2026 Significantly Shift the Comparison
QuickBooks raised UK prices across all plans in January 2026, with the Plus plan increasing by approximately 47% — from £34 to £50 per month — in a single update. The Essentials plan rose by around 15%. These increases are on top of a cumulative 75% rise in UK pricing since 2022. For a limited company contractor comparing the two platforms: FreeAgent’s limited company plan at £33 per month includes payroll and Self Assessment filing; QuickBooks Essentials at £33 per month does not include payroll (which costs extra) and does not include the project tracking available on FreeAgent’s plan. The total cost of ownership for a comparable QuickBooks feature set is materially higher than FreeAgent in 2026 for many UK small business structures.

Making Tax Digital & UK Tax Compliance

Both platforms are HMRC-recognised and MTD-compatible, but FreeAgent’s depth of UK-specific tax compliance is considerably greater than QuickBooks at an equivalent price point.

FreeAgent handles the full range of UK tax obligations within its standard subscription. VAT returns are generated automatically from bookkeeping records and submitted directly to HMRC in a format that satisfies Making Tax Digital for VAT requirements. Self Assessment tax returns are pre-populated from the data in a user’s FreeAgent account and filed directly to HMRC. For limited company users, Corporation Tax computations and year-end accounts can also be prepared and filed from within FreeAgent. As of April 2026, FreeAgent supports Making Tax Digital for Income Tax Self Assessment, covering the quarterly submission requirements for sole traders and landlords with qualifying income. The Tax Timeline feature gives users a live view of their estimated tax liability and payment deadlines throughout the year, reducing year-end surprises. This breadth of HMRC direct filing — covering VAT, Self Assessment, Corporation Tax, MTD for VAT, and MTD for Income Tax — from a single platform at a single flat price is one of FreeAgent’s most significant competitive advantages over QuickBooks for UK users.

QuickBooks Online is MTD-compatible from the Simple Start plan upward and supports VAT return submission directly to HMRC. The platform handles VAT calculations, error checks, and digital VAT filing efficiently. However, QuickBooks does not support direct Self Assessment filing, Corporation Tax filing, or Making Tax Digital for Income Tax from within the platform. UK businesses using QuickBooks for bookkeeping that need to file Self Assessment or Corporation Tax returns must use a separate accountant, third-party software, or file directly via HMRC’s own systems — a meaningful additional step that FreeAgent eliminates. For UK freelancers, sole traders, and limited company directors who want a single platform to handle both their bookkeeping and their HMRC filings, this gap is practically significant.

Invoicing & Payments

Both platforms offer professional invoicing with customisable templates, recurring invoices, and automated payment reminders. The practical differences lie in payment gateway breadth and client-facing experience.

FreeAgent’s invoicing is included on all plans and covers standard invoice creation with branding, automated payment reminders, recurring invoices, estimates that convert to invoices in one click, and direct online payment links via Stripe, GoCardless, PayPal, and Tyl by NatWest. The time tracking integration is particularly strong — hours logged against projects in FreeAgent feed directly into invoices without manual entry, making it well suited to consultants and contractors billing by the hour. The invoicing interface is clean and accessible to users without accounting backgrounds, which aligns with FreeAgent’s design philosophy of being approachable for non-accountants.

QuickBooks Online’s invoicing is also strong and available from the Simple Start plan. It supports customisable templates, recurring invoices, automated reminders, and online payment via integrated payment processing. QuickBooks offers a slightly broader range of payment integrations than FreeAgent out of the box, including connections to a wider range of payment processors via its app marketplace. For businesses with complex invoicing requirements — multiple currencies, detailed project billing, or high-volume invoice processing — QuickBooks’ invoicing scales more robustly, particularly on the Essentials and Plus plans. For a broader comparison of invoicing features across the market, our accounting software for freelancers guide covers how both platforms perform for UK freelance billing workflows.

Accounting & Reporting

QuickBooks leads on accounting depth and reporting flexibility; FreeAgent leads on UK-specific compliance reporting and accessible financial visibility for non-accountants.

QuickBooks Online offers genuinely deep accounting and reporting functionality across its plans. From Simple Start, users access profit and loss, balance sheet, cash flow, and accounts receivable and payable reports. The Plus and Advanced plans add class and location tracking, project profitability, custom report building, and budget-versus-actual comparisons. The chart of accounts on all plans supports up to 250 accounts (unlimited on Advanced). For businesses that need granular financial analysis — segmented by department, location, or product line — QuickBooks’ reporting capabilities significantly exceed FreeAgent’s. The platform also supports multi-currency transactions from the Essentials plan upward, including automatic exchange rate updates. This is a key advantage for UK businesses trading internationally.

FreeAgent’s accounting and reporting are well-designed and cover the needs of most small UK businesses and sole traders comprehensively. The dashboard provides a live view of cashflow, profit and loss, invoice status, and upcoming tax deadlines. The Radar feature provides trend-spotting and performance insights specific to the user’s business data. Standard reports include profit and loss, balance sheet, and cash flow — all of which are automatically produced from the bookkeeping records. Where FreeAgent is weaker than QuickBooks is in custom reporting, segmented analysis, and the depth available for businesses with complex financial structures or multiple cost centres. FreeAgent’s reporting is purpose-built for straightforward small business needs and is deliberately accessible rather than comprehensive. For a broader look at UK accounting software options, our reviews section covers FreeAgent, QuickBooks, Xero, and Sage in depth.

Payroll

This is one of the clearest and most financially significant differences between the two platforms for UK businesses: FreeAgent includes payroll as standard on all plans; QuickBooks charges extra for payroll on every tier.

FreeAgent’s payroll module covers monthly payroll runs for employees, automatic calculation of PAYE income tax and National Insurance contributions, Real Time Information (RTI) submissions directly to HMRC, and payslip generation. It is included in every FreeAgent subscription — sole trader, partnership, limited company, and landlord plans — at no additional cost. For limited company contractors paying themselves a director’s salary plus dividends, this makes FreeAgent particularly cost-effective: the payroll feature they need is already built in. The Corporation Tax computation module for limited companies also estimates the tax impact of dividend payments alongside salary, giving directors a clearer view of their overall tax position.

QuickBooks Online does not include payroll in any of its UK subscription plans. Payroll is available as a paid add-on — QuickBooks Payroll Core, Premium, or Elite — each billed separately on top of the accounting subscription. For a small limited company or partnership that needs payroll, this means the true monthly cost of QuickBooks is the accounting plan fee plus the payroll add-on fee, which materially changes the price comparison with FreeAgent. For businesses that use a separate payroll system or outsource payroll to an accountant, this distinction is irrelevant. For those that want payroll handled within their accounting platform, FreeAgent’s all-inclusive approach represents a genuine cost advantage.

“FreeAgent was designed by people who understood exactly what a UK contractor or small limited company director needs: one platform, one price, no surprises at tax time. QuickBooks was built to scale globally. In 2026, both do their respective jobs well — the question is whether you need UK-specific depth or global accounting power.”

Integrations & Ecosystem

QuickBooks has a substantially larger integrations ecosystem; FreeAgent has a focused set of high-quality integrations relevant to UK small businesses.

QuickBooks Online connects to over 750 third-party applications via its app marketplace, covering payment processing, e-commerce, payroll, CRM, project management, inventory, and more. Key integrations include Shopify, Amazon, Stripe, PayPal, Dext (formerly Receipt Bank), HubSpot, Salesforce, and many more. For businesses that rely on a broader software stack — combining their accounting platform with CRM, e-commerce, or specialist tools — QuickBooks’ ecosystem depth is a meaningful advantage. The platform also has a well-documented API for custom integrations, and the large developer community means support for niche tools is more readily available than with FreeAgent. Our guide to QuickBooks Online covers the integrations ecosystem in full detail.

FreeAgent’s integration set is more focused but includes the tools most relevant to UK freelancers and small businesses. Key integrations cover Stripe, GoCardless, PayPal, and Tyl by NatWest for payment processing; Open Banking bank feeds from most major UK banks; Dext, Engager, Bright, and Syft for accountant workflows; and Amazon for UK marketplace sellers. The Gusto payroll integration is not available in the UK market (FreeAgent handles payroll natively). FreeAgent’s API is available for developers, but the third-party app ecosystem is significantly smaller than QuickBooks’. For UK businesses that operate primarily with UK banks, UK payment processors, and UK-focused tools, the FreeAgent integration set covers the most common requirements without the complexity of navigating a 750-app marketplace. For businesses that need a broader integration landscape, our Xero alternatives guide covers platforms with strong ecosystems alongside FreeAgent and QuickBooks.

Feature Scores

Category-by-Category Scores
FreeAgent VS QuickBooks
Ease of Use
4.5
3.8
Accounting & Reporting
3.8
4.6
UK Tax & MTD Compliance
4.8
3.6
Payroll (included)
4.4
1.0
Value for Money (UK)
4.5
2.9
Integrations & Ecosystem
3.1
4.7
Scalability
3.0
4.5
Support Quality
4.4
3.5
FreeAgent
Pros
  • Payroll included as standard on all plans — no add-on fee, covers PAYE, NI, and RTI submissions to HMRC
  • Self Assessment filing direct to HMRC — sole traders and limited company directors file from within the platform
  • Corporation Tax estimates and year-end accounts filing for limited companies — no separate software needed
  • MTD for Income Tax supported — ready for quarterly HMRC submissions from April 2026
  • Free for NatWest, RBS, Ulster Bank, and Mettle business banking customers — significant cost saving
  • Unlimited users on all plans — add accountants, bookkeepers, and team members at no extra cost
  • Award-winning UK-based support team — phone and online support from qualified accountants
  • Time tracking and project management included — hours flow directly into client invoices
  • 50% introductory discount for first 6 months (monthly) or first year (annual) on all plans
Cons
  • Reporting depth is limited compared to QuickBooks — no custom reports, class tracking, or segmented analysis
  • No inventory management — not suitable for product-based businesses tracking stock
  • Smaller integrations ecosystem — far fewer third-party app connections than QuickBooks
  • Not well-suited to businesses outside the UK — features are UK-centric; the Universal account type lacks VAT, payroll, and tax filing
  • Limited scalability — designed for freelancers and small businesses; not suited to mid-market growth
  • No multi-currency trading support beyond the basics — limited for businesses invoicing in multiple currencies
  • Smart Capture (unlimited receipt scanning) requires a £5/month add-on beyond the 10 free monthly captures
QuickBooks Online
Pros
  • Deep accounting and reporting — profit and loss, balance sheet, cash flow, and custom reports with class and location tracking
  • Inventory management on Plus plan — track stock levels, purchase orders, and low stock alerts
  • 750+ third-party integrations — the widest app ecosystem of any accounting platform in its category
  • MTD-compatible VAT filing from Simple Start — direct HMRC submission with error checks
  • Multi-currency support from Essentials — automatic exchange rate updates for international businesses
  • Project profitability tracking on Plus — compare income vs expenses per project
  • Industry-standard platform — widely used by accountants and bookkeepers, making handover straightforward
  • Scales to Advanced plan — custom reporting, role-based access, and batch processing for larger businesses
Cons
  • Payroll is a paid add-on — not included in any UK subscription plan; increases true monthly cost significantly
  • No Self Assessment filing — UK sole traders and limited company directors must use separate software or an accountant
  • No Corporation Tax filing — limited company directors cannot file accounts or CT returns from QuickBooks
  • Steep 2026 UK price increases — Plus plan rose approximately 47% in January 2026; cumulative increases of 75% since 2022
  • Per-user pricing model on most plans limits access to 1–5 users depending on tier
  • Steeper learning curve than FreeAgent — more complex interface with a longer onboarding requirement
  • Support quality mixed — UK users report inconsistent response quality, particularly on lower-tier plans

Full Feature Comparison

Here is a side-by-side breakdown of how FreeAgent and QuickBooks Online compare across the features that matter most to UK freelancers, contractors, and small businesses in 2026. For related comparisons that may help inform your decision, see our guides to Sage vs QuickBooks and Xero vs QuickBooks in our comparisons section.

Feature FreeAgent QuickBooks Online
Entry Price (excl. VAT) £19/month (sole trader) / £33/month (limited company) £16/month (Simple Start)
Free Plan Yes — free for NatWest, RBS, Ulster Bank & Mettle customers No free plan; 30-day trial only
Unlimited Users Yes — all plans include unlimited users 1 user (Simple Start) to 5 users (Plus); Advanced only has more
Payroll Included Yes — all plans, no add-on fee No — paid add-on on all plans
Self Assessment Filing Yes — direct HMRC filing from all plans Not available
Corporation Tax Filing Yes — limited company accounts and CT filing Not available
MTD for VAT Yes — all plans, direct HMRC submission Yes — Simple Start and above
MTD for Income Tax Yes — quarterly submissions direct to HMRC Not directly supported
VAT Return Filing Yes — all plans Yes — Simple Start and above
Bank Feeds Yes — Open Banking feeds, all major UK banks Yes — all plans
Time Tracking Yes — all plans, flows into project invoices Yes — Essentials and above
Project Management Yes — all plans Yes — Plus and above
Inventory Management Not available Yes — Plus and above
Custom Reporting Not available — standard reports only Yes — Advanced plan
Class / Department Tracking Not available Yes — Plus and above
Multi-Currency Basic only — limited international support Yes — Essentials and above
Third-Party Integrations Focused UK set — Stripe, GoCardless, Dext, etc. 750+ apps in the QuickBooks app marketplace
Estimates / Quotes Yes — all plans Yes — Simple Start and above
Mobile App Yes — iOS and Android Yes — iOS and Android
UK-Based Support Yes — phone and online, staffed by qualified accountants Support quality inconsistent; UK phone support available but wait times variable
30-Day Free Trial Yes — all plans Yes — all plans

Support & Reliability

Support is one of FreeAgent’s most consistently praised differentiators. The platform employs a UK-based team of qualified accountants who staff both phone and online support channels, and user reviews across Capterra, GetApp, and Trustpilot in 2025 and 2026 frequently single out FreeAgent’s support responsiveness and expertise as a standout feature. For a small business owner or contractor who is not an accounting professional, having access to support agents who understand the software and UK tax rules — rather than generic technical support staff — is a practically meaningful advantage. FreeAgent has over 200,000 customers and has been operating since 2007, giving it a stable track record. Its ownership by NatWest Group since 2018 adds financial backing and infrastructure stability.

QuickBooks Online is the globally dominant accounting platform from Intuit and carries the reliability of one of the world’s largest software companies. For UK users, however, QuickBooks’ support experience receives more mixed reviews. Phone support is available but wait times are variable, and the breadth of the platform means that support agents must cover a much wider range of topics than FreeAgent’s more focused team. The extensive online knowledge base, community forums, and third-party accountant network partially compensate for the inconsistency in direct support quality. For businesses that work with an accountant who is familiar with QuickBooks — which is the majority of UK accounting practices — much of the support need is handled through that relationship rather than QuickBooks directly. Our QuickBooks alternatives guide covers what to consider if support quality is a primary driver of your platform decision.

Who Should Use Which?

Choose FreeAgent if…
FreeAgent
You are a UK freelancer, contractor, sole trader, or limited company director who wants a single platform to handle your bookkeeping, invoicing, payroll, VAT returns, Self Assessment, and Corporation Tax — without needing separate software or paying add-on fees for each function. FreeAgent is purpose-built for this audience and delivers more HMRC compliance capability at its price point than any comparable platform. It is also the clear choice if you bank with NatWest, RBS, Ulster Bank, or Mettle, where it is available entirely free. The unlimited user model makes it particularly cost-effective for small teams or businesses that want their accountant working in the same platform at no extra seat cost. For an in-depth look at the platform, our FreeAgent review covers features, pricing, and our hands-on verdict. For freelancers evaluating the full range of options, our accounting software for freelancers guide compares FreeAgent alongside its closest competitors.
Try FreeAgent Free
Choose QuickBooks if…
QuickBooks Online
You run a product-based business that needs inventory management, a growing business that needs class and location tracking for department-level reporting, or a business trading internationally that needs robust multi-currency accounting. QuickBooks Online is also the stronger choice for businesses that rely on a broad software stack and need deep integrations across CRM, e-commerce, payroll, and operations tools. If your accountant already uses QuickBooks and you want a seamless collaboration experience, staying within that ecosystem reduces friction. For US-based businesses or global operators, QuickBooks is the more natural fit than FreeAgent, which is designed primarily for the UK market. Our QuickBooks Online review covers the full platform in detail, and our guides to Wave vs QuickBooks and QuickBooks vs FreshBooks provide further comparison context.
Try QuickBooks Free
FreeAgent Is a Great Fit For…
UK contractors and limited company directors who want payroll, Self Assessment, and Corporation Tax handled in one platform with no additional software or add-on fees. Sole traders affected by Making Tax Digital for Income Tax from April 2026 who need a platform that handles quarterly MTD submissions directly. NatWest, RBS, Ulster Bank, and Mettle business banking customers who want full-featured accounting software at zero monthly cost. Freelancers and consultants who bill by the hour and need time tracking to flow cleanly into project invoices. Small teams and partnerships that need multiple users — including their accountant — to access the same account at no extra cost per seat.
FreeAgent Is Not the Right Fit If…
You sell physical products and need inventory management, stock level tracking, or purchase order workflows — FreeAgent does not offer these features; QuickBooks Plus covers them. You need custom financial reports segmented by department, location, or business unit — FreeAgent provides standard reports only; QuickBooks Plus and Advanced offer class and location tracking with custom report building. You operate internationally and need robust multi-currency accounting with automatic exchange rate updates — FreeAgent’s international support is limited; QuickBooks Essentials and above handle multi-currency well. You are not based in the UK — FreeAgent’s core value proposition is built entirely around UK HMRC compliance; non-UK users would miss most of the platform’s key features. For budget-conscious businesses exploring alternatives to both platforms, our guide to budget-friendly accounting software covers a wider range of options.

Our Final Verdict

In the FreeAgent vs QuickBooks comparison for UK businesses, the right choice is more audience-specific than in most software comparisons. FreeAgent wins for UK freelancers, contractors, and small limited company directors — it delivers the most complete UK tax compliance package at a flat, inclusive price, with payroll, Self Assessment, Corporation Tax, MTD, and unlimited users all included as standard. The free plan for NatWest and RBS banking customers is a unique offering with no meaningful equivalent in QuickBooks. QuickBooks wins for businesses that need depth in reporting, inventory management, international accounting, or a wide software integration ecosystem — the platform’s greater complexity is justified when those features are genuinely needed.

The January 2026 QuickBooks UK price increases make the value comparison starker than it was in prior years. A UK limited company contractor comparing the two platforms now faces a choice between FreeAgent at £33 per month (all-in, including payroll and tax filing) and QuickBooks Essentials at £33 per month plus a separate payroll add-on fee, without Self Assessment or Corporation Tax filing included. For that user profile, FreeAgent represents significantly better value in 2026. For a growing business with complex needs, however, QuickBooks’ depth remains hard to match. For further comparison context across the UK and global accounting software market, our guides to Sage vs QuickBooks, free accounting software, and Sage alternatives provide a comprehensive view of all major options available in 2026.

We tested both platforms through a standard UK small business workflow — onboarding as a limited company, creating client invoices, recording expenses, importing bank transactions via Open Banking, running payroll, generating a VAT return, and reviewing year-end reporting. FreeAgent completed the full UK compliance workflow faster and with less friction, particularly around payroll setup and MTD VAT submission. QuickBooks produced more detailed financial reports and handled multi-currency transactions more cleanly. Neither platform is the universal winner — the right choice depends on whether UK compliance breadth or accounting depth is the higher priority for your business. Based on hands-on testing of both platforms, May 2026
Best for UK Freelancers & Contractors

Try FreeAgent

Free for NatWest/RBS customers — from £19/month + VAT

Try FreeAgent Free
Best for Reporting & Growing Businesses

Try QuickBooks Online

30-day free trial — from £16/month + VAT

Try QuickBooks Free
JD
Jamie Davies
Senior Software Reviewer at 99Tools
Jamie has reviewed accounting and invoicing software for over eight years, with a particular focus on UK small business platforms, Making Tax Digital compliance, and cloud accounting tools for freelancers and contractors. Before joining 99Tools, he spent five years as a freelance developer and consultant working with UK clients across multiple sectors. He tests every platform hands-on before publishing a verdict, including live payroll runs, MTD VAT submissions, and bank reconciliation workflows where applicable.
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